CDS

Accession Number TCMCG017C23724
gbkey CDS
Protein Id OMO75426.1
Location join(15934..16026,16137..16233,16338..16461,16797..16982,17393..17480,17670..17726,17829..17918,18034..18156,18690..18764,18862..18921,19160..19276,19404..19643,19722..19787,19991..20080,20351..20440,20680..20769,20887..20955,21416..21496,21599..21706,21790..21893,21974..22087,22192..22402)
GeneID InterPro:IPR005378
Organism Corchorus olitorius
locus_tag COLO4_26119

Protein

Length 790aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019207.1
Definition Vacuolar protein sorting-associated protein 35 [Corchorus olitorius]
Locus_tag COLO4_26119

EGGNOG-MAPPER Annotation

COG_category U
Description Plays a role in vesicular protein sorting
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K18468        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0030904        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGTTAAACGGAGCAGAGGATGAAGAGAAATGGCTGGCAGAAGGAATCGCCGGTATTCAACACAACGCCTTTTACATGCATCAAGCTTTGGACTCCAATAATCTGAGAGAAGCTCTCAAGTACTCTGCTCTGATGCTGTCCGAGCTCCGGACCTCCAAACTCTCTCCTCACAAGTATTACGAACTCTATATGCGAGCTTTTGATGAGTTGAGGAAATTGGAGATGTTCTTCAAAGACGAGAGCAAACACGGCGTTTCTGTGGTTGATCTGTACGAACTAGTACAGCATGCCGGCAATATCTTGCCTAGATTGTATCTCCTATGTACGGTAGGATCTGTCTATATCAAATCTAAGGAGGCTCCTGCCAAGGAAGTTCTTAAGGACCTTGTGGAAATGTGTCGTGGAGTTCAACATCCCATACGTGGACTCTTTTTAAGGAGTTACCTTGCTCAAATCAGTCGCGACAAGTTACCGGATATTGGTTCTGAGTTTGAAGGAGATGCTGAAACTGTGATGGATGCTGTGGAATTTGTGCTGCAGAATTTCACCGAGATGAATAAACTTTGGGTGCGATTGCAGCATCAGGGACCTGGTACAGTTAGAGAGAAGCGGGAAAAAGAAAGGAACGAGCTTCGAGATCTTGTAGGAAAAAATCTCCATGTTCTCAGTCAGATAGAAGGGGTGGACCTTGAGATGTACAAAGAAACAGTTCTTCCCAGAATCGTAGAGCAGGTTGTCAATTGCAAAGATGATCTGGCCCAATATTATCTGATGGATTGCATAATCCAGGTGTTCCCGGATGAGTATCACTTGCAGACTCTTGAGACATTATTGGGTGCTTGCCCACAACTGCAGCCAACAGTTGACATCAAGACTGTGTTGTCTCGACTAATGGACAGACTGTCAAATTATGCTGCTTCAAGTCCAGATGTGCTACCTGAATTTCTGCAAGTAGAAGCCTTTGCTAAACTGAGCAAAGCAATTGGGAAGGTCATAGAGGCACAGATTGACATGCCTGCTGTTGGAGCTATAACTCTGTATGTCTCTCTTCTTACATTTACCCTTCGTGTGCATCCCGATCGGCTTGATTATGTGGATCAAGTGCTGGGAGCCTGTGACAAGAAGCTCTCCACCATACCAAAACTTGGAGACAGCCGGGCAACAAAACAAGTGGTTGCACTTTTGAGTGCTCCACTGGAGAAATACAATGATATAGTAACAGCCCTGAGACTTTCTAATTATCCACGTGTGATGGATCATCTTGATAATGGAACAAATAAAGTAATGGCGATGGTTATCATTCAAAGCATTATGAAAAATAGCTCTTGCATATCTACTCCTGACAAGGTTGAGGTGTTGTTCGAATTATTAAAAGGTCTCATTAAGGACATGGATGGTGCTGATGTGGATGAGCTTGATGAGGAGGATTTCAAGGAAGAACAAAATTCTGTTGCTCGCCTCATACACATGCTTTATAATGATGAACCCGAGGAAATGTTGAAGATTATATGCACGGTGAGGAAGCATACTATGGCTGGGGGACCAAAACGCCTGCCTTATACAGTTCCATCTCTTGTTTTTTCTGCACTTAGGTTGGTTAGGCGATTGCAAGGTCAGGAGGGAGATATAGTAGGGGAAGAAGTGCCTGCGACACCTAAGAAAATTTTTCAGCTCCTGACTCAGATCATCGAGTCACTTTCTATTGTTCCAGCACCTGAACTTGCTTTAAGGTTATACCTGCAATGTGCTGAGGCTGCTAATGATTGTGATCTTGAGCATGTTGCTTATGATTTTTTCACTCAAGCTTTTGTATTATATGAAGAAGAAATTGCGGACTCCAAATCCCAAGTGACTGCAATTCATCTAATAATTGGGACTCTCCAGAGGATGAGTGTGTTTGGTGTTGAGAACCGAGATACTTTGACACACAAAGCCACAGGATACTCAGCTAGGCTATTAAAGAAGCCTGATCAGTGCAGAGCAGTTTATGCATGTTCACATCTTTTTTGGGTCGATGATCAGGATGGCCTTAAGGATGGGGAAAGGGTCCTGCTCTGCCTAAAGCGTGCATTGAGGATTGCAAATGCTGCTCAGCAAATGGCGAATGTTGCACGGGGTAGCAGTGGGCCTGTCACACTCTTTGTTGAGATATTGAACAAGTACCTCTACTTCTTTGAAAAAGGAAATCCGCAAATCACGAGTGCAGCAATCCAAGACCTCATAGAACTAATCAAGACCGAGATGCAGAGTGATTCTGCAACCCCAGATACTGCCTCGGACGCTTTCCTTGCCAGCATGTTGCGTTACATTCAGTTCCAGAAACAAAAAGGTGGTGTAATGGGTGAGAAGTTTGAATCCATTAAATTGTAA
Protein:  
MMLNGAEDEEKWLAEGIAGIQHNAFYMHQALDSNNLREALKYSALMLSELRTSKLSPHKYYELYMRAFDELRKLEMFFKDESKHGVSVVDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKEVLKDLVEMCRGVQHPIRGLFLRSYLAQISRDKLPDIGSEFEGDAETVMDAVEFVLQNFTEMNKLWVRLQHQGPGTVREKREKERNELRDLVGKNLHVLSQIEGVDLEMYKETVLPRIVEQVVNCKDDLAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMDRLSNYAASSPDVLPEFLQVEAFAKLSKAIGKVIEAQIDMPAVGAITLYVSLLTFTLRVHPDRLDYVDQVLGACDKKLSTIPKLGDSRATKQVVALLSAPLEKYNDIVTALRLSNYPRVMDHLDNGTNKVMAMVIIQSIMKNSSCISTPDKVEVLFELLKGLIKDMDGADVDELDEEDFKEEQNSVARLIHMLYNDEPEEMLKIICTVRKHTMAGGPKRLPYTVPSLVFSALRLVRRLQGQEGDIVGEEVPATPKKIFQLLTQIIESLSIVPAPELALRLYLQCAEAANDCDLEHVAYDFFTQAFVLYEEEIADSKSQVTAIHLIIGTLQRMSVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWVDDQDGLKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYLYFFEKGNPQITSAAIQDLIELIKTEMQSDSATPDTASDAFLASMLRYIQFQKQKGGVMGEKFESIKL